Publications

2025

1. 

   Multi-omic analysis reveals transkingdom gut dysbiosis in metabolic dysfunction-associated steatotic liver disease

   Hanseul Kim, Paul Nelson, Etienne Nzabarushimana, Jiaxian Shen, Jordan Jensen, Amrisha Bhosle, Chengchen Li, Nawon Lee, Christine Everett, and 12 more authors

   Nature Metabolism, 2025

   HTML Press
2. Association of distinct microbial and metabolic signatures with microscopic colitis

   Albert Sheng-Yin Chen, Hanseul Kim, Etienne Nzabarushimana, Jiaxian Shen, Katherine Williams, Jenny Gurung, Jessica McGoldrick, Kristin E Burke, Joseph C Yarze, and 2 more authors

   Nature Communications, 2025
3. 1046: PULSED ANTIBIOTIC THERAPY AND LATERAL GENE TRANSFER EVENTS

   Etienne Nzabarushimana, Philipp C Münch, Jiaxian Shen, Hanseul Kim, Daniel Sikavi, Tiffany Hsu, Alice C McHardy, Eric A Franzosa, Curtis Huttenhower, and 1 more author

   Gastroenterology, 2025
4. 629: COMPOSITION AND FUNCTION OF THE GUT MICROBIOME IN MICROSCOPIC COLITIS

   Albert S Chen, Hanseul Kim, Etienne Nzabarushimana, Jiaxian Shen, Katherine M Williams, Jenny Gurung, Jessica McGoldrick, Kristin E Burke, Joseph C Yarze, and 2 more authors

   Gastroenterology, 2025
5. 908: ASSOCIATION BETWEEN SUGAR-SWEETENED AND ARTIFICIALLY SWEETENED BEVERAGE INTAKE AND GASTRIC CANCER INCIDENCE

   Tae-Geun Gweon, Hanseul Kim, Jane Ha, Mengxi Du, Mingyang Song, and Andrew T Chan

   Gastroenterology, 2025
6. 178: ULTRA-PROCESSED FOOD CONSUMPTION AND RISK OF EARLY-ONSET COLORECTAL CANCER PRECURSORS AMONG WOMEN: A PROSPECTIVE US COHORT STUDY

   Chen Wang, Mengxi Du, Hanseul Kim, Long H Nguyen, Neha Khandpur, Qi Sun, Xiaoyu Zong, Edward Giovannucci, David A Drew, and 2 more authors

   Gastroenterology, 2025

2024

1. Intestinal Blastocystis is linked to healthier diets and more favorable cardiometabolic outcomes in 56,989 individuals from 32 countries

   Elisa Piperni*, Long H Nguyen*, Paolo Manghi, Hanseul Kim, Edoardo Pasolli, Sergio Andreu-Sánchez, Alberto Arrè, Kate M Bermingham, Aitor Blanco-Mı́guez, and 2 more authors

   Cell, 2024
2. Altered microbial transcription in long-term proton pump inhibitor usage: findings from a US cohort study

   Hanseul Kim, Etienne Nzabarushimana, Curtis Huttenhower, Andrew T Chan, and Long H Nguyen

   Gastroenterology, 2024

   HTML Press
3. Vitamin D status and cancer incidence, mortality, and prognosis

   Hanseul Kim, Irene Shui, and Edward Giovannucci

   In Feldman and Pike’s Vitamin D , 2024
4. 871 METATRANSCRIPTOMIC ACTIVITY OF ORAL-TYPICAL MICROBES IN PROTON PUMP INHIBITOR USAGE

   Hanseul Kim, Etienne Nzabarushimana, Curtis Huttenhower, Andrew T Chan, and Long H Nguyen

   Gastroenterology, 2024
5. Mo1728 CONCURRENT AND HABITUAL DIET DIFFERENTIALLY ASSOCIATE WITH MICROBIAL MULTI-OMIC PROFILES IN INFLAMMATORY BOWEL DISEASE (IBD)

   Jiaxian Shen, Etienne Nzabarushimana, Hanseul Kim, Hannah L VanEvery, Yiqing Wang, Kelsey N Thompson, Andrew T Chan, Curtis Huttenhower, and Long H Nguyen

   Gastroenterology, 2024
6. 4 ALTERED GUT VIRAL ECOLOGY IN METABOLIC DYSFUNCTION-ASSOCIATED STEATOTIC LIVER DISEASE (MASLD)

   Etienne Nzabarushimana, Hanseul Kim, Jordan Jensen, Jiaxian Shen, Paul Nelson, Kelsey N Thompson, Andrew T Chan, Boris Hayete, Curtis Huttenhower, and 1 more author

   Gastroenterology, 2024
7. 496 HARMONIZED METAGENOMIC SIGNATURES OF GUT MICROBIAL COMMUNITIES REVEAL STRAIN-SPECIFIC LINKS TO INFLAMMATORY BOWEL DISEASE

   Kelsey N Thompson, Siyuan Ma, Amrisha Bhosle, William A Nickols, Andrew Ghazi, Yancong Zhang, Etienne Nzabarushimana, Hanseul Kim, Ramnik Xavier, and 2 more authors

   Gastroenterology, 2024

2023

1. Plant-based dietary patterns and the risk of digestive system cancers in 3 large prospective cohort studies

   Jihye Kim, Jaewon Khil, Hanseul Kim, NaNa Keum, Xuehong Zhang, and Edward Giovannucci

   European Journal of Epidemiology, 2023
2. 635 THE SULFUR MICROBIAL DIET AND RISK OF INFLAMMATORY BOWEL DISEASE

   Daniel Y Kim, Daniel Sikavi, Hanseul Kim, Yiqing Wang, Raaj S Mehta, Etienne Nzabarushimana, Hamed Khalili, Ashwin Ananthakrishnan, Curtis Huttenhower, and 2 more authors

   Gastroenterology, 2023
3. 276 INTERACTIONS BETWEEN HOST DIETARY INTAKE AND GUT MICROBIAL TRANSCRIPTION IN INFLAMMATORY BOWEL DISEASE

   Etienne Nzabarushimana, Hannah L VanEvery, Hanseul Kim, Raaj Mehta, Yancong Zhang, Wenjie Ma, Kelsey N Thompson, Daniel Y Kim, Yin Cao, and 2 more authors

   Gastroenterology, 2023
4. 446 ALTERATIONS IN GUT MICROBIAL COMPOSITION, METABOLITES, AND TRANSCRIPTIONAL ACTIVITY AMONG PARTICIPANTS WITH NONALCOHOLIC FATTY LIVER DISEASE

   Hanseul Kim, Paul Nelson, Kelsey N Thompson, Long H Nguyen, Boris Hayete, and Curtis Huttenhower

   Gastroenterology, 2023
5. 1244 POPULATION-LEVEL IMPACT OF A METABOLICALLY-AND MICROBIALLYINFORMED DIET ON WEIGHT CHANGE AND OBESITY-RELATED COMPLICATIONS

   Hanseul Kim, Emily Leeming, Jordi Merino, Daniel Kim, David A Drew, Francesco Asnicar, Inbar Linenberg, Kate Bermingham, Lucy Francis, and 2 more authors

   Gastroenterology, 2023
6. Influence of analytic methods, data sources, and repeated measurements on the population attributable fraction of lifestyle risk factors

   You Wu, Hanseul Kim, Kai Wang, Mingyang Song, Molin Wang, Rulla Tamimi, Heather Eliassen, Stephanie A Smith-Warner, Walter C Willett, and 1 more author

   European Journal of Epidemiology, 2023
7. Being breastfed in infancy and risk of colorectal cancer and precursor lesions

   Chen Yuan, Qiao-Li Wang, Hanseul Kim, Ana Babic, Jinming Zhang, Brian M Wolpin, Kana Wu, Mingyang Song, Shuji Ogino, and 2 more authors

   Clinical Gastroenterology and Hepatology, 2023

2022

1. Population attributable risk for colorectal and breast cancer in England, Wales, Scotland, Northern Ireland, and the United Kingdom

   Shatabdi Goon, Hanseul Kim, and Edward L Giovannucci

   AMRC Open Research, 2022
2. Total calcium, dairy foods and risk of colorectal cancer: a prospective cohort study of younger US women

   Hanseul Kim, Jinhee Hur, Kana Wu, Mingyang Song, Molin Wang, Stephanie A Smith-Warner, Xuehong Zhang, and Edward L Giovannucci

   International Journal of Epidemiology, 2022
3. Vitamin D, calcium, and early-onset colorectal neoplasia

   Hanseul Kim

   Harvard University , 2022
4. Prediagnostic vitamin D status and colorectal cancer survival by vitamin D-binding protein isoforms in the US cohorts

   Hanseul Kim, Chen Yuan, Long H Nguyen, Kimmie Ng, and Edward L Giovannucci

   The Journal of Clinical Endocrinology & Metabolism, 2022
5. Assessing preventability of postmenopausal breast cancer by lifestyle risk factors: influence by method, data source, and timing of exposure measurement

   You Wu, Hanseul Kim, Kai Wang, Mingyang Song, Molin Wang, Rulla Tamimi, Heather Eliassen, Stephanie Smith-Warner, Walter Willett, and 1 more author

   2022
6. A comparative study of healthy dietary patterns for incident and fatal digestive system cancer

   Jihye Kim, Yin Zhang, Hanseul Kim, Yiwen Zhang, Xuehong Zhang, and Edward Giovannucci

   Official journal of the American College of Gastroenterology| ACG, 2022

2021

1. Which blood cutoff value should be used for vitamin A deficiency in children aged 3–10 years? A systematic review

   Tatiana S Collese, Marina M Norde, Marcus V Nascimento-Ferreira, Hanseul Kim, Dirce M Marchioni, Heráclito B Carvalho, and Edward Giovannucci

   Nutrition Reviews, 2021
2. A comparison of methods in estimating population attributable risk for colorectal cancer in the United States

   Hanseul Kim, Kai Wang, Mingyang Song, and Edward L Giovannucci

   International Journal of Cancer, 2021
3. Total vitamin D intake and risks of early-onset colorectal cancer and precursors

   Hanseul Kim, Marla Lipsyc-Sharf, Xiaoyu Zong, Xiaoyan Wang, Jinhee Hur, Mingyang Song, Molin Wang, Stephanie A Smith-Warner, Charles Fuchs, and 2 more authors

   Gastroenterology, 2021

2020

1. Obesity and efficacy of vitamin D3 supplementation in healthy black adults

   Hanseul Kim, Paulette Chandler, Kimmie Ng, JoAnn E Manson, and Edward Giovannucci

   Cancer Causes & Control, 2020
2. Vitamin D Status and Cancer Incidence, Survival, and Mortality

   Hanseul Kim, and Edward Giovannucci

   In Sunlight, Vitamin D and Skin Cancer , 2020

2019

1. Different dietary fibre sources and risks of colorectal cancer and adenoma: a dose–response meta-analysis of prospective studies

   Hannah Oh*, Hanseul Kim*, Dong Hoon Lee, Ariel Lee, Edward L Giovannucci, Seok-Seong Kang, and NaNa Keum

   British Journal of Nutrition, 2019

2018

1. Garlic intake and gastric cancer risk: Results from two large prospective US cohort studies

   Hanseul Kim, NaNa Keum, Edward L Giovannucci, Charles S Fuchs, and Ying Bao

   International journal of cancer, 2018
2. Adolescent body mass index and risk of colon and rectal cancer in a cohort of 1.79 million Israeli men and women: A population-based study

   Hanseul Kim, Mingyang Song, and Edward L Giovannucci

   Cancer, 2018

2017

1. Calcium as a chemopreventive agent against colorectal neoplasm: does obesity play a role?

   NaNa Keum, Hanseul Kim, and Edward L Giovannucci

   Cancer Causes & Control, 2017
2. Sex differences in the association of obesity and colorectal cancer risk

   Hanseul Kim, and Edward L Giovannucci

   Cancer Causes & Control, 2017